M.Sc Applied Microbiology: Admission 2025, Syllabus, Eligibility, Fees, Colleges, Careers

• Updated on  Jul 31, 2025, by Sachin Jaiswal

M.Sc in Applied Microbiology is a 2-year postgraduate course exploring the roles of microorganisms in healthcare, industry, agriculture, and the environment. It is common among the engineering and life-science graduates, and it combines the microbiology theory and research practice, and therefore prepares students to be explorative in vaccines, fermentation, and environmental monitoring.

 

M.Sc in Applied Microbiology typically requires a Bachelor’s degree in a relevant subject such as Microbiology, Biotechnology, Botany, Zoology, Biochemistry, Medical Lab Technology, Veterinary Science, Agriculture, or any allied Life Science field. Most colleges expect candidates to have secured at least 50% aggregate marks in their undergraduate degree, with a relaxation of about 5% in marks for reserved category students. Admission to the course can be based either on merit, determined by the marks obtained in the qualifying degree, or through entrance examinations such as CUET PG, ICAR AIEEA, depending on the institution.

 

The average course fee for studying M.Sc Applied Microbiology in India ranges between INR 50,000-3,00,00, depending on the institute offering the course. Generally the fees at government colleges are lower in comparison to private institutions. Some of the best colleges in India are Banaras Hindu University (BHU), Kerala Veterinary and Animal Sciences University, Utkal University, Banasthali Vidyapith, Centurion University, and others.

 

Careers available are those of Microbiologist, Quality Control Analyst, Research Scientist, and Clinical Microbiologist. Salaries ranging from INR 3-6 LPA are offered to entry-level positions, depending upon specialisation and sector. Strong growth opportunities are available in the form of leading recruiters like Biocon, Dr. Reddy, Nestle or the various major hospitals for the technically skilled graduates.

 

Table of Contents

  1. M.Sc in Applied Microbiology Course Highlights
  2. What is M.Sc in Applied Microbiology?
  3. Why Study M.Sc Applied Microbiology?
  4. Who Should Study M.Sc in Applied Microbiology?
  5. M.Sc Applied Microbiology Eligibility Criteria
  6. M.Sc Applied Microbiology Entrance Exams 2025
  7. M.Sc Applied Microbiology Best Colleges in India
  8. M.Sc Applied Microbiology Admission Process 2025
  9. M.Sc Applied Microbiology Syllabus and Duration
  10. M.Sc Applied Microbiology Job Opportunities in India
  11. M.Sc Applied Microbiology FAQs

 

M.Sc in Applied Microbiology Course Highlights

M.Sc in Applied Microbiology course offers great career prospects in research, healthcare, and industry. Here are the key highlights of the M.Sc in Applied Microbiology course in India:

Parameter

Details

Course Name

M.Sc Applied Microbiology

Course Level

Postgraduate

Duration

2 Years

Course Type

Full-Time / Part-Time

Admission Process

Entrance Exam and/or Merit-Based

Eligibility Criteria

B.Sc in Microbiology, Life Sciences, Biotechnology or related field with minimum 50–60% marks

Course Fees

INR 50,000 – 3,00,000

Top Colleges

Banaras Hindu University (BHU), Kerala Veterinary and Animal Sciences University, Utkal University, Banasthali Vidyapith, Sri Padmavati Mahila Visvavidyalayam, Sri Sankara Arts & Science College, Centurion University, St. Thomas College

Job Profiles

Microbiologist, Quality Control Officer, Clinical Research Associate, Lab Technician, R&D Scientist

Top Recruiters

Biocon, Dr. Reddy's Laboratories, Pfizer, GSK, Hospitals, Government & Research Institutes

Average Salary in India

INR 3–6 LPA for freshers; increases with experience

 

What is M.Sc in Applied Microbiology?

M.Sc Applied Microbiology is a two-year postgraduate program that delves into the advanced study of microorganisms such as bacteria, viruses, fungi, and protozoa and explores their vital applications in medicine, agriculture, industry, biotechnology, and environmental management.

 

The programme is aimed at developing expertise to deal with the problems in the area of healthcare (including prevention and treatment of diseases), food safety, enhancement of pharmaceutical processes, waste management, and environmental sustainability.

 

Graduates of M.Sc Applied Microbiology are well-prepared for careers in research organisations, hospitals, biotechnology companies, food and beverage industries, and public health agencies.

 

Why Study M.Sc Applied Microbiology?

M.Sc Applied Microbiology is an advanced degree for those passionate about understanding microorganisms and their pivotal roles in daily life. Various careers and research opportunities in the field of science open up because of this program. Few basic reasons to pursue this course are:

  • Trains graduates to work in high-demand jobs in the field of healthcare, pharmaceutical, and biotechnology by learning the updated microbiological practices.
  • Increases the research and problem-solving abilities, allowing the graduates to be able to solve real-life issues, including infectious diseases, food safety, and environmental management.
  • Provides experience in the contemporary laboratory techniques, apparatus, and methods used in clinical diagnosis, vaccine research and development, as well as industrial usage.
  • Promotes multidisciplinary training, which integrates multiple disciplines such as genetics, immunology, and molecular biology together with microbiology to enhance the scope of microbiology.
  • Increases flexibility of career, the alumni may serve in hospitals or research labs, food processing industries in environmental monitoring or in governmental health institutions.

 

Who Should Study M.Sc in Applied Microbiology?

Those with a strong curiosity about how microorganisms impact health, environment, and industry are ideal candidates for M.Sc Applied Microbiology. Some of the best suited candidates are:

  • People who are interested in working in the laboratories, doing experiments, and conducting practical research in the fields of biology.
  • Individuals seeking employment in research and development in pharmaceuticals, agriculture or the environment.
  • Students who have demonstrated strong analytical skills and an eye for detail, which is required to be precise in microbiology studies.
  • People who might be thinking of an academic or teaching position in the microbiology or related fields, and have plans to enter into further education, such as a Ph.D.
  • Practitioners who want to advance their careers in health diagnosis, vaccine companies, or biotech firms.
  • Any person interested in interdisciplinary work between microbiology and genetics, immunology, environmental science, or molecular biology.

 

M.Sc Applied Microbiology Eligibility Criteria

The M.Sc Applied Microbiology program has specific eligibility standards to ensure candidates can excel in advanced studies. The requirements in relation to admission can be slightly different at various universities. The basic eligibility criteria are as follows:

  • Bachelor’s degree in a relevant subject such as Microbiology, Biotechnology, Botany, Zoology, Biochemistry, Medical Lab Technology, Veterinary Science, Agriculture, or any allied Life Science field is required.
  • Most colleges require a minimum of 50% aggregate marks in the qualifying undergraduate degree; reserved category candidates may receive a 5% relaxation.
  • Admissions may be based on merit (marks obtained in the qualifying degree) or through entrance examinations such as CUET PG or ICAR AIEEA, depending on the institute.
  • There is generally no age limit for applying to this course.

 

M.Sc Applied Microbiology Entrance Exams 2025

Entrance exams for M.Sc Applied Microbiology play a vital role in the admission process across India. These exams are conducted at both national and state levels, ensuring fair selection for candidates from diverse regions. Here are the details of the key entrance exams.

Exam Name

Application Date (Tentative)

Exam Date (Tentative)

Application Fee (INR)

CUET PG

December 2025

March 2026

INR 1200 (Gen)

 

INR 1000 (OBC)

 

INR 900 (SC/ST)

ICAR AIEEA PG

January 2026

April 2026

INR 1200 (Gen)

 

INR 600 (Reserved)

 

M.Sc Applied Microbiology Best Colleges in India

India is home to several premier institutes offering M.Sc Applied Microbiology, blending rigorous academic training with strong research and industry connections. The following table highlights some of the best colleges offering this program.

College Name

Location

Course Fees (Approx.)

Banaras Hindu University (BHU)

Uttar Pradesh

INR 80,000

Kerala Veterinary and Animal Sciences University

Kerala

INR 3,14,633

Utkal University

Odisha

INR 1,20,000

Banasthali Vidyapith

Rajasthan

INR 2,00,000

Sri Padmavati Mahila Visvavidyalayam

Andhra Pradesh

INR 3,00,000

Sri Sankara Arts & Science College

Tamil Nadu

INR 72,000

Centurion University

Odisha

INR 2,00,000

St. Thomas College

Kerala

INR 48,700

Also read about M.Sc Microbiology

 

M.Sc Applied Microbiology Admission Process 2025

The admission process is similar in all institutes offering the course, each follows a simple and standardised procedure. For reference, the admission process at Banasthali Vidyapith is given below:

 

Step 1: Visit the official website of the college and look for M.Sc Applied Microbiology course, click on apply now.

 

Step 2: Fill in the application form with the required details and submit it by paying the application fee.

 

Step 3: After this, register for the CUET-PG entrance exam and take the exam on a scheduled date and time. Wait for the results to be declared.

 

Step 4: After the results are declared check your score or rank and submit it to the college.

 

Step 5: The college will release a list of shortlisted candidates based on CUET PG cutoffs. The selected candidates may be called for a personal interview. They also have to undergo document verification.

 

Step 6: After document verification, a provisional admission offer is given after which the candidates need to pay the semester fee or admission fee to finalize their seat in the course.

 

Step 7: After the payment is done, the final admission offer will be provided, then the candidate will be able to begin the course when the new session begins.

 

Required Documents:

  • Mark sheets of Class 10 &12
  • Transcript of B.Sc., degree certificate
  • CUET-PG scorecard/ admit card
  • Aadhaar/PAN
  • Passport-sized photographs
  • Caste/EWS certificate (wherever applicable)
  • Character & migration certificates

 

M.Sc Applied Microbiology Syllabus and Duration

The M.Sc Applied Microbiology program spans two years and is divided into four semesters. The syllabus integrates core microbiological subjects, advanced laboratory work, and a research project, ensuring a strong theoretical foundation and practical expertise for students. For reference, the syllabus followed at Banaras Hindu University (BHU) is given below:

Semester I

Semester II

AMM-101 – General Microbiology

AMM-201 – Environmental Microbiology and Wastewater Management

AMM-102 – Biochemical and Molecular Techniques

AMM-202 – Immunology

AMM-103 – Microbial Metabolism

AMM-203 – Microbial Genomics

AMM-104 – Microbial Genetics

AMM-204 – Microbial Enzyme Technology

AMM-105 – Lab work based on Course AMM-101 and Course AMM-102

AMM-205 – Lab work based on Course AMM-201 and Course AMM-202

AMM-106 – Lab work based on Course AMM-103 and Course AMM-104

AMM-206 – Lab work based on Course AMM-203 and Course AMM-204

-

AMM-207 – Microbial Diversity, Management and Exploitation (Minor Elective)

Semester III

Semester IV

AMM-301 – Bioprocess Technology and Engineering

AMM-401 – Dissertation work and Viva-voce examination

AMM-302 – Medical Microbiology

AMM-402 – Seminar presentation

AMM-303 – Agricultural Microbiology

-

AMM-304 – Food and Dairy Microbiology

-

AMM-305 – Lab work based on Course AMM-301 and Course AMM-302

-

AMM-306 – Lab work based on Course AMM-303 and Course AMM-304

-

AMM-307 M# – Microbial Biogeochemistry (Minor Elective)

-

Click to read more about MSc Medical Microbiology

 

M.Sc Applied Microbiology Job Opportunities in India

M.Sc Applied Microbiology opens diverse career avenues in India’s growing science sector. Graduates can explore opportunities in pharmaceuticals, research, healthcare, food, and environment-focused organisations. The table below highlights prominent job profiles, experience requirements, leading recruiters, average salaries, and key sectors.

Job Profile

Experience

Top Recruiters

Average Salary

Microbiologist

0–2 years

Biocon, Serum Institute, Dr. Reddy’s, Cipla

INR 2.5–4.5 LPA

Quality Control Analyst

1–3 years

Nestlé, Coca-Cola, Britannia, GSK

INR 3–5 LPA

Research Scientist

2–5 years

Bharat Biotech, ICMR, Reliance Life Sciences

INR 5–8 LPA

Clinical Microbiologist

0–3 years

Apollo Hospitals, AIIMS, Fortis

INR 3–6 LPA

Environmental Microbiologist

0–3 years

NEERI, CPCB, TERI

INR 3–5 LPA

Project/Research Associate

0–2 years

CSIR, DBT, ICAR Institutions

INR 3–4.5 LPA

Medical Writer

0–2 years

Pharma & Health Media Firms

INR 3–4 LPA

Industrial Microbiologist

1–4 years

Manufacturing & Biotech Firms

INR 2.9–5 LPA

Quality Control Manager

4+ years

Food, Pharma, Biotech Companies

INR 7 LPA

Know more about MVSc Veterinary Microbiology

 

M.Sc Applied Microbiology FAQs

Can students pursue M.Sc in Applied Microbiology through distance or online education in India?

Yes, a limited number of universities now offer M.Sc in Applied Microbiology through distance learning or online modes, catering mainly to working professionals. Nevertheless, as this course is more laboratory in nature, online programs, in general, involve face-to-face labs or other brief residence periods at specialised campuses. Distance degrees can be either recognised or valued based on the institution of interest and the destination career group.

What is the nature of the internships/ field training opportunities offered during the M.Sc Applied Microbiology?

Most universities have an arrangement with research laboratories, healthcare facilities, biotechnology companies, and food industries to do a 2-6 month internship or project activities. The internships enable students to acquire practical skills in microbial testing, industrial fermentation, clinical diagnosis, or quality assurance and considerably increase job chances upon graduation.

Are international students eligible to apply for M.Sc Applied Microbiology programs in India?

Yes, several Indian universities admit international students to their M.Sc Applied Microbiology programs. The candidates are required to provide evidence of equivalent academic qualification, scores of English proficiency (such as IELTS or TOEFL, when possible), and they might have to go through certain visa procedures.

What professional certifications can enhance my career after M.Sc Applied Microbiology?

Certifications like Good Laboratory Practices (GLP), Hazard Analysis and Critical Control Points (HACCP), Quality Control certificates, and advanced training in molecular diagnostic measures are examples of certifications that can help graduates become competitive in higher job positions.

How can M.Sc Applied Microbiology graduates contribute to startups or entrepreneurship?

Familiarity with microbial technologies enables graduates either to start up their own companies or to enter an incubator in bioremediation, probiotic development, food safety testing, or green biotechnology. Aspiring entrepreneurs are provided with seed funds, mentorship, and innovation centres in both universities and government agencies in the sector.

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ExamApr 2, 2025 - Apr 9, 2025
ResultApr 18, 2025 - Apr 19, 2025
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IITs and IISc|
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Birla Institute of Technology and Science|
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West Bengal Joint Entrance Examinations Board|
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ExamApr 27, 2025
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Consortium of National Law Universities|
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ExamDec 1, 2024
ResultMay 17, 2025
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National Testing Agency (NTA)|
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ExamMay 10, 2025 - May 16, 2025
ResultJul 15, 2025
Offline|
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Central Board of Secondary Education
ExamJan 1, 2025 - Jan 22, 2025
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ExamMay 4, 2025
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